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Pinellia ternate (Thunb.) Berit
source:Chinese Herbal Plant Genome Database  time:2017-06-10 17:06:20

Year: 2016

Institution: Yunnan Research Center on Good Agricultural Practice for Dominant Chinese Medicinal Materials, Yunnan Agricultural University, Kunming, China

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Material

Data

Assembly

Annotation

Sequencing platform

Data size (Gb)

Method

Contig N50 (bp)

Average length (bp)

Unigenes

Tubers. Located in Shizong County, Yunnan

province, southwest of China (24◦ 46 40′′N, 104◦ 5 34′′E,

alt. 1886 m).

Illumina HiSeq 2500

located in Shizong County, Yunnan

province, southwest of China (24◦ 46 40′′N, 104◦ 5 34′′E,

alt. 1886 m).

TrinityTGICL

1,112

750

120,983

Nr, Swiss-Prot, KEGG, COG

Publication

Zhang G, Jiang N, Song W, et al. De novo   sequencing and transcriptome analysis of Pinellia ternata identify the   candidate genes involved in the biosynthesis of benzoic acid and   ephedrine[J]. Frontiers in plant science, 2016, 7.

Data link

https://trace.ncbi.nlm.nih.gov/Traces/sra/ ?run= SRX484200




Year: 2016

InstitutionMinistry of Education Key Laboratory of Standardization of Chinese Herbal

Medicine, College of Pharmacy

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Material

Data

Assembly

Annotation

Sequencing platform

Data size (Gb)

Method

Contig N50 (bp)

Average length (bp)

Unigenes

Whole plant. Hongjiang (Peng xi County, Suining City, Sichuan Province,   China; 30.69°N, 105.45°E).

Illumina HiSeq 2000

0.227

Trinity

907

611

53,544

NrSwiss-ProtGOCOGKEGG

Publication

Zhang G, Jiang N, Song W, et al. De novo   sequencing and transcriptome analysis of Pinellia ternata identify the   candidate genes involved in the biosynthesis of benzoic acid and   ephedrine[J]. Frontiers in plant science, 2016, 7.

Data link

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