Species: Allium sativum
Sample
Sample Location: collected from the Department of Vegetables Germplasm Resource, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences.
Sample Part: leaf
Sequencing
Sequencing platform: Illumina HiSeq
Sequencing data: 85.73 Gb clean data,
Assembly and Annotation
Assembly software: Trinity
Assembly result: 470,253 transcripts, with average length of 1,074 bp, N50 of 1,490 bp. 175,275 unigenes, with average length of 899 bp, N50 of 1,245 bp.
Annotation Method: NR, Swiss-prot, COG, eggNOG, Pfam, GO, KEGG
Reference
Kong, Qiusheng et al. “Comparative transcriptome profiling reveals that brassinosteroid-mediated lignification plays an important role in garlic adaption to salt stress.” Plant physiology and biochemistry : PPB vol. 158 (2021): 34-42.
Reference url