Species: Pfaffia glomerata
Sample
Sample Location: the Germplasm Bank of Plant Tissue Culture Laboratory, BIOAGRO,Federal University of Viçosa, Brazil
Sample Part: leaves, stems, roots, and flowers
Sequencing
Sequencing platform: Illumina GAIIx
Sequencing data: 798,237,392 million paired-end sequence reads and 779,824,316 high-quality reads
Assembly and Annotation
Assembly software: Trinity
Assembly result: 164,439 unigenes (49,091 ORFs with an average length of 959.49 bp and an N50 length of 1,534 bp).
Annotation Method: GO, Nr, InterPro,KEGG
Reference
Batista D S, Koehler A D, Romanel E, et al. De novo assembly and transcriptome of Pfaffia glomerata uncovers the role of photoautotrophy and the P450 family genes in 20-hydroxyecdysone production[J]. Protoplasma, 2019, 256(3): 601-614.
Reference url