Species: Alisma orientale
Accession Number
SRP124598
Sample
Sample Location: Jian'ou County, Nanping City, Fujian Province in July 2016.
Sample Part: roots, leaves, scapes and inflorescences
Sequencing
Sequencing platform: Illumina HiSeq 4000
Sequencing data: 372,971,128 clean reads
Assembly and Annotation
Assembly software: Trinity
Assembly result: 41,685 unigenes (lengths ranged from 199 bp to13,455 bp, the average length was 1,117 bp, the N50 length was 1,727 bp, the GC percentage was 47.39%, and the number of total assembled bases were 46,562,041)
Annotation Method: Nr, SwissProt, GO, KOG, KEGG
Data Url
Reference
Lin W, Sun F, Zhang Y, et al. Comparative transcriptome and metabolite profiling of four tissues from Alisma orientale (Sam.) Juzep reveals its inflorescence developmental and medicinal characteristics[J]. Scientific reports, 2019, 9(1): 1-12.
